ENSPLAP00000006126 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPLAP00000006126

Uncharacterized protein. (646 aa)

Predicted Functional Partners:

fau

0.873

ENSPLAP00000005116

0.671

gle1

0.664

ENSPLAP00000009945

0.641

fras1

0.629

rps27a

0.619

frem1

0.610

LOC106957509

0.610

rps21

0.596

arl6ip1

0.596

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000005116	ENSPLAP00000006126	ENSPLAP00000005116	ENSPLAP00000006126	NIDO domain-containing protein.	Uncharacterized protein.	0.671
ENSPLAP00000005116	ENSPLAP00000009945	ENSPLAP00000005116	ENSPLAP00000009945	NIDO domain-containing protein.	VWFD domain-containing protein.	0.596
ENSPLAP00000005116	LOC106957509	ENSPLAP00000005116	ENSPLAP00000012660	NIDO domain-containing protein.	Fras1 related extracellular matrix 1b.	0.507
ENSPLAP00000005116	fau	ENSPLAP00000005116	ENSPLAP00000005244	NIDO domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.629
ENSPLAP00000005116	fras1	ENSPLAP00000005116	ENSPLAP00000029552	NIDO domain-containing protein.	Fraser extracellular matrix complex subunit 1.	0.509
ENSPLAP00000005116	frem1	ENSPLAP00000005116	ENSPLAP00000011960	NIDO domain-containing protein.	Fras1 related extracellular matrix 1a.	0.507
ENSPLAP00000005116	rps27a	ENSPLAP00000005116	ENSPLAP00000025723	NIDO domain-containing protein.	Ribosomal protein S27a.	0.457
ENSPLAP00000006126	ENSPLAP00000005116	ENSPLAP00000006126	ENSPLAP00000005116	Uncharacterized protein.	NIDO domain-containing protein.	0.671
ENSPLAP00000006126	ENSPLAP00000009945	ENSPLAP00000006126	ENSPLAP00000009945	Uncharacterized protein.	VWFD domain-containing protein.	0.641
ENSPLAP00000006126	LOC106957509	ENSPLAP00000006126	ENSPLAP00000012660	Uncharacterized protein.	Fras1 related extracellular matrix 1b.	0.610
ENSPLAP00000006126	arl6ip1	ENSPLAP00000006126	ENSPLAP00000016746	Uncharacterized protein.	ADP-ribosylation factor-like 6 interacting protein 1.	0.596
ENSPLAP00000006126	fau	ENSPLAP00000006126	ENSPLAP00000005244	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.873
ENSPLAP00000006126	fras1	ENSPLAP00000006126	ENSPLAP00000029552	Uncharacterized protein.	Fraser extracellular matrix complex subunit 1.	0.629
ENSPLAP00000006126	frem1	ENSPLAP00000006126	ENSPLAP00000011960	Uncharacterized protein.	Fras1 related extracellular matrix 1a.	0.610
ENSPLAP00000006126	gle1	ENSPLAP00000006126	ENSPLAP00000000075	Uncharacterized protein.	GLE1 RNA export mediator.	0.664
ENSPLAP00000006126	rps21	ENSPLAP00000006126	ENSPLAP00000000675	Uncharacterized protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.596
ENSPLAP00000006126	rps27a	ENSPLAP00000006126	ENSPLAP00000025723	Uncharacterized protein.	Ribosomal protein S27a.	0.619
ENSPLAP00000009945	ENSPLAP00000005116	ENSPLAP00000009945	ENSPLAP00000005116	VWFD domain-containing protein.	NIDO domain-containing protein.	0.596
ENSPLAP00000009945	ENSPLAP00000006126	ENSPLAP00000009945	ENSPLAP00000006126	VWFD domain-containing protein.	Uncharacterized protein.	0.641
ENSPLAP00000009945	LOC106957509	ENSPLAP00000009945	ENSPLAP00000012660	VWFD domain-containing protein.	Fras1 related extracellular matrix 1b.	0.610