STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106963009Stem-loop binding protein. (270 aa)    
Predicted Functional Partners:
mif4gd
MIF4G domain containing a.
    
 
 0.964
eri1
Exoribonuclease 1.
   
 
 0.854
lsm10
LSM10, U7 small nuclear RNA associated.
   
 
 0.813
ctif
CBP80/20-dependent translation initiation factor.
    
 
 0.806
lsm11
LSM11, U7 small nuclear RNA associated.
     
 0.800
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.797
ENSPLAP00000002631
Uncharacterized protein.
   
 
 0.692
snrpd1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 
 0.692
ranbp2
RAN binding protein 2.
   
 
  0.689
ENSPLAP00000000084
Small nuclear ribonucleoprotein polypeptide F.
   
 
 0.688
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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