Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam110bFamily with sequence similarity 110 member B. (479 aa)    
Predicted Functional Partners:
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
    
   0.752
LOC106950687
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.737
LOC106951307
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
   0.737
LOC106960426
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
    
   0.737
CSNK1D
Casein kinase 1 delta.
    
   0.737
tmem106a
Transmembrane protein 106A.
      
 0.682
ankrd49
Ankyrin repeat domain 49.
      
 0.640
nsmaf
Neutral sphingomyelinase (N-SMase) activation associated factor.
      
 0.640
ENSPLAP00000006028
One cut domain family member.
      
 0.633
cux1
Cut-like homeobox 1b.
      
 0.633
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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