STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBP3Latent transforming growth factor beta binding protein 3. (1235 aa)    
Predicted Functional Partners:
LOC106947507
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.853
ENSPLAP00000014374
Protein kinase domain-containing protein.
   
 0.735
tgfb3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.719
LOC106957248
LIM domain kinase 1a.
    
 0.717
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.685
tgfb2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.676
LOC106936703
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.676
LOC106949081
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.672
LOC106939021
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.638
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.638
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.