Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
c5Anaphylatoxin-like domain-containing protein. (1304 aa)    
Predicted Functional Partners:
C5AR1
Complement C5a receptor 1.
    
 0.999
C8A
Complement C8 alpha chain.
   
 0.998
c9
Complement component 9.
   
 0.998
LOC106948860
Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family.
   
 0.997
f2
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
   
 0.983
LOC106937002
Uncharacterized protein.
   
0.964
ENSPLAP00000026839
NTR domain-containing protein.
   
0.964
c3
Uncharacterized protein.
   
0.964
ENSPLAP00000002865
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.927
LOC106937003
NTR domain-containing protein.
     
 
0.900
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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