STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syce3Uncharacterized protein. (98 aa)    
Predicted Functional Partners:
ENSPLAP00000004898
Uncharacterized protein.
    
 0.869
sycp3
Synaptonemal complex protein 3.
     
 0.675
smc3
Structural maintenance of chromosomes protein.
     
 0.654
znf318
Uncharacterized protein.
      
 0.542
spata22
Spermatogenesis associated 22.
      
 0.534
PRDM6
PR/SET domain 6.
    
   0.514
LOC106936115
Uncharacterized protein.
     
 0.508
meiob
Methionine sulfoxide reductase B1b.
      
 0.495
ENSPLAP00000025224
Zebrafish testis-expressed 38.
      
 0.487
ENSPLAP00000026016
HORMA domain containing 1.
      
 0.487
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.