STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000006409Uncharacterized protein. (482 aa)    
Predicted Functional Partners:
LOC106952749
BHLH domain-containing protein.
    
  0.669
LOC106940530
Myelocytomatosis oncogene homolog.
    
  0.664
sp1
Sp1 transcription factor.
    
 
0.634
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
   0.632
LOC106962582
Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
    
  0.613
LOC106945081
Transcriptional regulator Myc-like.
    
  0.613
ENSPLAP00000014192
NDK domain-containing protein.
    
 0.604
ENSPLAP00000012682
Uncharacterized protein.
    
  0.566
ENSPLAP00000012707
Uncharacterized protein.
    
  0.566
LOC106962473
ANK_REP_REGION domain-containing protein.
    
  0.548
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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