ENSPLAP00000006444 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPLAP00000006444

Uncharacterized protein. (429 aa)

Predicted Functional Partners:

rsad2

0.830

LOC106957545

0.776

leo1

0.766

ifih1

0.723

ENSPLAP00000014192

0.695

bbs9

0.654

ints13

0.637

bbs7

0.632

ints1

0.628

ttc8

0.624

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000006444	ENSPLAP00000014192	ENSPLAP00000006444	ENSPLAP00000014192	Uncharacterized protein.	NDK domain-containing protein.	0.695
ENSPLAP00000006444	LOC106957545	ENSPLAP00000006444	ENSPLAP00000012405	Uncharacterized protein.	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.	0.776
ENSPLAP00000006444	bbs7	ENSPLAP00000006444	ENSPLAP00000014213	Uncharacterized protein.	Bardet-Biedl syndrome 7.	0.632
ENSPLAP00000006444	bbs9	ENSPLAP00000006444	ENSPLAP00000008006	Uncharacterized protein.	Bardet-Biedl syndrome 9.	0.654
ENSPLAP00000006444	ifih1	ENSPLAP00000006444	ENSPLAP00000019102	Uncharacterized protein.	Interferon induced with helicase C domain 1.	0.723
ENSPLAP00000006444	ints1	ENSPLAP00000006444	ENSPLAP00000009933	Uncharacterized protein.	Integrator complex subunit 1.	0.628
ENSPLAP00000006444	ints13	ENSPLAP00000006444	ENSPLAP00000000438	Uncharacterized protein.	Integrator complex subunit 13.	0.637
ENSPLAP00000006444	leo1	ENSPLAP00000006444	ENSPLAP00000005905	Uncharacterized protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.766
ENSPLAP00000006444	rsad2	ENSPLAP00000006444	ENSPLAP00000008921	Uncharacterized protein.	Radical S-adenosyl methionine domain containing 2.	0.830
ENSPLAP00000006444	ttc8	ENSPLAP00000006444	ENSPLAP00000006320	Uncharacterized protein.	Tetratricopeptide repeat domain 8.	0.624
ENSPLAP00000014192	ENSPLAP00000006444	ENSPLAP00000014192	ENSPLAP00000006444	NDK domain-containing protein.	Uncharacterized protein.	0.695
ENSPLAP00000014192	ttc8	ENSPLAP00000014192	ENSPLAP00000006320	NDK domain-containing protein.	Tetratricopeptide repeat domain 8.	0.688
LOC106957545	ENSPLAP00000006444	ENSPLAP00000012405	ENSPLAP00000006444	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.776
LOC106957545	ifih1	ENSPLAP00000012405	ENSPLAP00000019102	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.	Interferon induced with helicase C domain 1.	0.918
LOC106957545	rsad2	ENSPLAP00000012405	ENSPLAP00000008921	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.	Radical S-adenosyl methionine domain containing 2.	0.968
bbs7	ENSPLAP00000006444	ENSPLAP00000014213	ENSPLAP00000006444	Bardet-Biedl syndrome 7.	Uncharacterized protein.	0.632
bbs7	bbs9	ENSPLAP00000014213	ENSPLAP00000008006	Bardet-Biedl syndrome 7.	Bardet-Biedl syndrome 9.	0.999
bbs7	ttc8	ENSPLAP00000014213	ENSPLAP00000006320	Bardet-Biedl syndrome 7.	Tetratricopeptide repeat domain 8.	0.999
bbs9	ENSPLAP00000006444	ENSPLAP00000008006	ENSPLAP00000006444	Bardet-Biedl syndrome 9.	Uncharacterized protein.	0.654
bbs9	bbs7	ENSPLAP00000008006	ENSPLAP00000014213	Bardet-Biedl syndrome 9.	Bardet-Biedl syndrome 7.	0.999