Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106959784Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a. (648 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
  0.845
LOC106959947
Netrin g1a.
    
 0.837
LOC106948690
Vav 3 guanine nucleotide exchange factor b.
    
 0.837
traf7
TNF receptor-associated factor 7.
    
 0.795
ENSPLAP00000014192
NDK domain-containing protein.
   
 0.777
tonsl
Tonsoku-like, DNA repair protein.
   
 0.773
LOC106961962
DUF4201 domain-containing protein.
    
  0.762
ENSPLAP00000028153
Uncharacterized protein.
    
   0.758
ENSPLAP00000021729
Uncharacterized protein.
    
   0.757
ENSPLAP00000025226
PARK2 co-regulated.
    
   0.751
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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