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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adgrb1Adhesion G protein-coupled receptor B1b; Belongs to the G-protein coupled receptor 2 family. (1464 aa)    
Predicted Functional Partners:
ranbp2
RAN binding protein 2.
   
 0.989
kpnb1
Karyopherin (importin) beta 1.
   
 0.921
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.899
ENSPLAP00000026852
RanBP2-type domain-containing protein.
    
 0.891
LOC106935927
Ran GTPase activating protein 1b.
   
 0.883
rangap1
RAN GTPase activating protein 1a.
   
 0.883
nup50
Nucleoporin 50.
   
  0.838
nup214
Nup214_FG domain-containing protein.
    
 0.825
ENSPLAP00000001662
Uncharacterized protein.
   
 0.820
gcc2
GRIP domain-containing protein.
   
 0.820
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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