STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106935807Uncharacterized protein. (559 aa)    
Predicted Functional Partners:
LOC106954037
Uncharacterized protein.
     
 0.948
LOC106954039
Fibronectin type-III domain-containing protein.
     
 0.929
il10
Interleukin 10.
     
 0.921
ifngr2
Uncharacterized protein.
     
0.660
ppp1r13l
Protein phosphatase 1, regulatory subunit 13 like.
     
 0.632
tp53bp2
Tumor protein p53 binding protein, 2a.
     
 0.632
ppp1r13b
Protein phosphatase 1, regulatory subunit 13Bb.
     
 0.632
ENSPLAP00000013205
Uncharacterized protein.
     
 0.614
LOC106962697
Tumor protein p53 binding protein, 2b.
     
 0.581
LOC106958423
Uncharacterized protein.
     
 0.540
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.