Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bbox1Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1. (553 aa)    
Predicted Functional Partners:
LOC106954306
Aldehyde dehydrogenase 9 family, member A1b; Belongs to the aldehyde dehydrogenase family.
  
 0.967
aldh9a1
Aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1; Belongs to the aldehyde dehydrogenase family.
  
 0.967
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
  
 0.948
LOC106936651
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.922
LOC106935123
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.922
aldh7a1
Aldehyde dehydrogenase 7 family, member A1.
  
 0.917
cryl1
Crystallin, lambda 1.
    
 0.895
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
    
   0.795
tank
TRAF family member-associated NFKB activator.
    
   0.775
trim9
Tripartite motif containing 9.
    
 
 0.732
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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