STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106959755Poly (ADP-ribose) glycohydrolase a. (756 aa)    
Predicted Functional Partners:
parp1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 0.884
parp3
Poly [ADP-ribose] polymerase.
    
 0.862
ENSPLAP00000005122
Uncharacterized protein.
    
 0.847
LOC106941517
Poly [ADP-ribose] polymerase.
    
 0.847
LOC106953687
Von Willebrand factor A domain containing 5B2.
    
 0.803
ENSPLAP00000015202
Uncharacterized protein.
    
 0.803
ENSPLAP00000015543
Poly [ADP-ribose] polymerase.
    
 0.803
ENSPLAP00000027155
Si:cabz01080528.1.
    
 0.803
ENSPLAP00000029074
Poly [ADP-ribose] polymerase.
    
 0.803
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
   0.722
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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