Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000006573Uncharacterized protein. (882 aa)    
Predicted Functional Partners:
ENSPLAP00000030043
Uncharacterized protein.
   
 0.985
LOC106943660
Uncharacterized protein.
   
 0.905
LOC106943606
Laminin, beta 2 (laminin S).
   
 0.905
lamb1
Laminin, beta 1a.
   
 0.905
LAMA2
Laminin subunit alpha 2.
   
 0.889
smg7
SMG7 nonsense mediated mRNA decay factor.
      
 0.840
lama4
Laminin, alpha 4.
   
 0.809
ENSPLAP00000000681
Laminin, alpha 5.
   
 0.809
ENSPLAP00000010328
Uncharacterized protein.
   
 0.809
ENSPLAP00000026192
Si:ch211-241e1.3.
   
 0.809
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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