STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106956510Uncharacterized protein. (427 aa)    
Predicted Functional Partners:
pald1
Phosphatase domain containing paladin 1a.
      
 0.594
ENSPLAP00000016448
Carbohydrate sulfotransferase.
      
 0.594
depdc4
Si:ch211-265o23.1.
 
    
 0.594
LOC106960992
Acyl-CoA binding domain containing 4.
      
 0.593
ENSPLAP00000014245
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.545
ENSPLAP00000022406
Carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b.
      
 0.545
LOC106938888
Carbohydrate sulfotransferase.
      
 0.537
LOC106953553
Peptidylprolyl isomerase.
      
 0.518
tecr
Trans-2,3-enoyl-CoA reductase b.
     
 0.493
LOC106958234
Trans-2,3-enoyl-CoA reductase-like 2a.
     
 0.493
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.