Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
alplAlkaline phosphatase. (526 aa)    
Predicted Functional Partners:
LOC106948497
Alkaline phosphatase.
  
  
 
0.902
ENSPLAP00000020715
Alkaline phosphatase.
  
  
 
0.902
LOC106948654
GTP cyclohydrolase 2.
    
  0.900
gch1
GTP cyclohydrolase 1.
    
  0.900
ntpcr
Nucleoside-triphosphatase, cancer-related.
     
  0.900
LOC106950781
Thiamin pyrophosphokinase 1.
     
  0.900
pts
6-pyruvoyl tetrahydrobiopterin synthase.
     
  0.900
spcs2
Signal peptidase complex subunit 2.
   
   0.757
psat1
Phosphoserine aminotransferase.
     
 0.695
ttf2
Transcription termination factor, RNA polymerase II.
    
  0.680
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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