STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alplAlkaline phosphatase. (526 aa)    
Predicted Functional Partners:
LOC106948654
GTP cyclohydrolase 2.
  
 
  0.944
gch1
GTP cyclohydrolase 1.
  
 
  0.936
LOC106948497
Alkaline phosphatase.
  
  
 
0.910
acp1
LMWPc domain-containing protein.
    
 0.909
ENSPLAP00000020715
Alkaline phosphatase.
  
  
 
0.892
psat1
Phosphoserine aminotransferase.
     
 0.830
ttf2
Transcription termination factor, RNA polymerase II.
    
  0.795
acp7
Purple acid phosphatase.
  
 
 0.725
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.721
LOC106959721
Serine--pyruvate aminotransferase.
    
 0.708
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.