Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zfyve19Zinc finger, FYVE domain containing 19. (425 aa)    
Predicted Functional Partners:
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.901
vta1
Vesicle (multivesicular body) trafficking 1.
    
 
 0.873
rps27a
Ribosomal protein S27a.
    
  0.856
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.845
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.845
LOC106955782
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 
 0.788
LOC106939979
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
   
 
 0.788
ENSPLAP00000010314
MIT domain-containing protein.
   
 
 0.788
LOC106942951
Vacuolar protein sorting-associated protein 4A.
   
 
 0.788
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 
 0.788
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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