Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106961870Abl-interactor 1b. (496 aa)    
Predicted Functional Partners:
LOC106939223
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.997
LOC106935082
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.997
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 0.996
nckap1
NCK-associated protein 1.
    
 0.987
LOC106954661
Uncharacterized protein.
    
 0.985
ENSPLAP00000022366
Uncharacterized protein.
    
 0.985
wasf3
WASP family member 3b.
    
 0.985
wasf1
WASP family member 1.
   
 0.974
wasf2
WASP family member 2.
   
 0.974
LOC106947065
Uncharacterized protein.
    
 0.971
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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