STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000006693PDZ domain-containing protein. (145 aa)    
Predicted Functional Partners:
actn1
Actinin, alpha 1.
    
 0.903
ACTN4
Actinin alpha 4.
    
 0.903
LOC106956426
Membrane associated guanylate kinase, WW and PDZ domain containing 1a.
 
   
 
0.884
ENSPLAP00000023486
Uncharacterized protein.
 
      0.827
magi1
Uncharacterized protein.
 
      0.818
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.758
LOC106939343
Membrane associated guanylate kinase, WW and PDZ domain containing 2a.
 
  
  0.721
CDC42
Cell division cycle 42.
    
 0.655
LOC106964683
Cell division cycle 42.
    
 0.655
pten
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
    
 0.647
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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