STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000006718Uncharacterized protein. (584 aa)    
Predicted Functional Partners:
bub3
BUB3 mitotic checkpoint protein.
    
 0.681
nudc
NudC nuclear distribution protein.
     
 0.673
dctn1
Dynactin 1b.
    
 
 0.639
LOC106935494
Dynactin 1a.
    
 
 0.639
cdc20
Cell division cycle 20 homolog.
     
 0.620
trim36
Tripartite motif containing 36.
    
 
 0.609
plk1
Serine/threonine-protein kinase PLK.
    
 0.596
plk3
Serine/threonine-protein kinase PLK.
    
 0.596
plk2
Serine/threonine-protein kinase PLK.
    
 0.596
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.590
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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