STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
saal1Serum amyloid A-like 1. (442 aa)    
Predicted Functional Partners:
TMEM19
Transmembrane protein 19.
      
 0.497
LOC106941414
Switching B cell complex subunit SWAP70b.
      
 0.482
ENSPLAP00000007131
Uncharacterized protein.
      
 0.480
LOC106936513
Transglutaminase 2, like.
      
 0.452
plekhm3
Pleckstrin homology domain containing, family M, member 3.
      
 0.408
sergef
Secretion regulating guanine nucleotide exchange factor.
      
 0.406
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.