STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
larp1La ribonucleoprotein domain family, member 1. (1092 aa)    
Predicted Functional Partners:
dkc1
Dyskeratosis congenita 1, dyskerin.
   
 
 0.744
DHX15
DEAH-box helicase 15.
   
 
 0.678
LOC106946581
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 
 0.665
trub1
TruB pseudouridine (psi) synthase family member 1.
   
 
 0.645
LOC106961328
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.640
pabpc1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.640
LOC106935437
Uncharacterized protein.
   
 
 0.640
pabpc4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.640
LOC106947998
RRM domain-containing protein.
   
 
 0.640
eif4b
Eukaryotic translation initiation factor 4Bb.
   
 
 0.580
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.