Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tmem108Transmembrane protein 108. (456 aa)    
Predicted Functional Partners:
susd5
Sushi domain containing 5.
      
 0.881
LOC106959821
Uncharacterized protein.
      
 0.712
LOC106954365
Cortexin 1.
      
 0.686
ASTE1
Asteroid homolog 1.
      
 0.642
LOC106958843
XPGN domain-containing protein.
      
 0.642
nek4
NIMA-related kinase 4.
      
 0.545
prkar2b
Protein kinase cAMP-dependent type II regulatory subunit beta.
      
 0.537
pik3r4
Phosphoinositide-3-kinase, regulatory subunit 4.
      
 0.537
LOC106962355
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.536
vps45
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.512
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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