Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXO | fbf1 | ENSPLAP00000012020 | ENSPLAP00000006752 | Decapping exoribonuclease. | Uncharacterized protein. | 0.924 |
DXO | rpap2 | ENSPLAP00000012020 | ENSPLAP00000003830 | Decapping exoribonuclease. | RNA polymerase II associated protein 2. | 0.624 |
DXO | xrn2 | ENSPLAP00000012020 | ENSPLAP00000005439 | Decapping exoribonuclease. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.995 |
fbf1 | DXO | ENSPLAP00000006752 | ENSPLAP00000012020 | Uncharacterized protein. | Decapping exoribonuclease. | 0.924 |
fbf1 | polr2a | ENSPLAP00000006752 | ENSPLAP00000005384 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.969 |
fbf1 | polr2b | ENSPLAP00000006752 | ENSPLAP00000000044 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.958 |
fbf1 | polr2c | ENSPLAP00000006752 | ENSPLAP00000015761 | Uncharacterized protein. | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.852 |
fbf1 | polr2d | ENSPLAP00000006752 | ENSPLAP00000013683 | Uncharacterized protein. | Polymerase (RNA) II (DNA directed) polypeptide D. | 0.841 |
fbf1 | polr2f | ENSPLAP00000006752 | ENSPLAP00000000201 | Uncharacterized protein. | Polymerase (RNA) II (DNA directed) polypeptide F. | 0.822 |
fbf1 | polr2g | ENSPLAP00000006752 | ENSPLAP00000017993 | Uncharacterized protein. | Polymerase (RNA) II (DNA directed) polypeptide G-like. | 0.828 |
fbf1 | polr2i | ENSPLAP00000006752 | ENSPLAP00000024445 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.832 |
fbf1 | rpap2 | ENSPLAP00000006752 | ENSPLAP00000003830 | Uncharacterized protein. | RNA polymerase II associated protein 2. | 0.883 |
fbf1 | xrn2 | ENSPLAP00000006752 | ENSPLAP00000005439 | Uncharacterized protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.925 |
polr2a | fbf1 | ENSPLAP00000005384 | ENSPLAP00000006752 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.969 |
polr2a | polr2b | ENSPLAP00000005384 | ENSPLAP00000000044 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
polr2a | polr2c | ENSPLAP00000005384 | ENSPLAP00000015761 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.999 |
polr2a | polr2d | ENSPLAP00000005384 | ENSPLAP00000013683 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Polymerase (RNA) II (DNA directed) polypeptide D. | 0.999 |
polr2a | polr2f | ENSPLAP00000005384 | ENSPLAP00000000201 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Polymerase (RNA) II (DNA directed) polypeptide F. | 0.999 |
polr2a | polr2g | ENSPLAP00000005384 | ENSPLAP00000017993 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Polymerase (RNA) II (DNA directed) polypeptide G-like. | 0.999 |
polr2a | polr2i | ENSPLAP00000005384 | ENSPLAP00000024445 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
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