STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947745Tetraspanin. (232 aa)    
Predicted Functional Partners:
ptgfrn
Uncharacterized protein.
    
 
 0.820
cd9
Tetraspanin.
  
 
 
0.762
LOC106956228
Tetraspanin.
  
 
 
0.761
LOC106956135
Uncharacterized protein.
    
 0.713
cd82
Tetraspanin.
    
0.697
LOC106949318
Tetraspanin.
    
0.697
cd63
Tetraspanin.
    
 
0.605
LOC106956637
Immunoglobulin superfamily, member 8.
    
 
 0.578
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.568
LOC106949456
Macrophage stimulating 1 receptor a.
    
  0.568
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.