Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106959166Myosin_tail_1 domain-containing protein. (1168 aa)    
Predicted Functional Partners:
gata4
GATA binding protein 4.
    
  0.925
LOC106961235
Tight junction protein 1a; Belongs to the MAGUK family.
    
  0.911
LOC106937846
Tight junction protein 1b; Belongs to the MAGUK family.
    
  0.911
arhgef2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
     
  0.900
cgn
Cingulin a.
     
 
0.900
arhgef18
Rho/rac guanine nucleotide exchange factor (GEF) 18b.
     
  0.900
LOC106960375
Rho/rac guanine nucleotide exchange factor (GEF) 18a.
     
  0.900
ENSPLAP00000020292
Uncharacterized protein.
    
 0.742
ranbp2
RAN binding protein 2.
    
 0.641
tbc1d31
TBC1 domain family, member 31.
    
  0.562
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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