Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
btbd9BTB (POZ) domain containing 9. (613 aa)    
Predicted Functional Partners:
ubxn1
UBX domain protein 1.
    
   0.974
faf1
Fas (TNFRSF6) associated factor 1.
    
   0.974
ubxn7
UBX domain protein 7.
    
   0.974
LOC106937213
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.905
CUL3
Cullin 3; Belongs to the cullin family.
    
 
 0.905
usp25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
   
   0.786
usp28
Ubiquitin carboxyl-terminal hydrolase.
   
   0.786
map2k5
Mitogen-activated protein kinase kinase 5.
      
 0.720
LOC106937625
TGF_BETA_2 domain-containing protein.
      
 0.718
immp2l
Mitochondrial inner membrane protease subunit.
      
 0.711
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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