Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106961857H2A histone family, member Y; Belongs to the histone H2A family. (368 aa)    
Predicted Functional Partners:
parp1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
   
 
 0.951
mysm1
Myb-like, SWIRM and MPN domains 1.
  
 0.951
ENSPLAP00000006651
Zgc:165656.
    
 
 0.909
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 0.880
glyr1
Glyoxylate reductase 1 homolog (Arabidopsis).
   
   0.862
LOC106956331
Histone H2A; Belongs to the histone H2A family.
   
 0.856
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 0.856
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.853
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.853
xpc
Xeroderma pigmentosum, complementation group C.
    
   0.838
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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