STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953622T-box transcription factor Ta. (421 aa)    
Predicted Functional Partners:
LOC106956667
Notochord homeobox.
    
 0.798
LOC106948175
POU domain protein.
   
 0.711
foxh1
Forkhead box H1.
   
 
 0.703
gata4
GATA binding protein 4.
   
 0.690
mixl1
Mix paired-like homeobox.
   
 0.680
bmp4
Bone morphogenetic protein 4.
     
 0.660
snai2
Snail family zinc finger 2.
    
 0.654
foxa2
Forkhead box A2.
    
 0.644
gata6
GATA binding protein 6.
   
 0.639
LOC106959978
Eomesodermin homolog a.
  
 
0.620
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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