STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000006833Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
LOC106935102
TAP binding protein (tapasin), tandem duplicate 2.
   
 0.886
suox
Sulfite oxidase.
    
  0.864
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.716
LOC106943806
Proteasome subunit beta 12.
   
 0.697
ENSPLAP00000027208
Proteasome subunit beta 9a.
   
 0.697
LOC106951845
Protein disulfide-isomerase.
   
  0.691
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
  
 0.685
pdia3
Protein disulfide-isomerase.
   
 0.647
pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
   
 0.647
LOC106936274
Calreticulin.
   
 0.639
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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