STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106937726Anion exchange protein. (974 aa)    
Predicted Functional Partners:
arhgap1
Uncharacterized protein.
     
 0.469
dnali1
Dynein, axonemal, light intermediate chain 1.
   
  
 0.468
nphs2
NPHS2 stomatin family member, podocin.
    
 0.454
LOC106945113
N-ethylmaleimide-sensitive factor b; Belongs to the AAA ATPase family.
   
  0.437
nsf
Uncharacterized protein.
   
  0.437
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.437
ENSPLAP00000028939
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
  0.437
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.433
LOC106958335
Cytochrome b5 domain containing 1; Belongs to the cytochrome b5 family.
   
    0.426
LOC106942586
Tyrosine-protein kinase.
    
  0.424
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.