Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
letmd1LETM1 domain containing 1. (361 aa)    
Predicted Functional Partners:
TMEM43
Uncharacterized protein.
    
   0.778
DLK1
Delta like non-canonical Notch ligand 1.
    
   0.718
cip2a
Cell proliferation regulating inhibitor of protein phosphatase 2A.
      
 0.639
LOC106947685
Uncharacterized protein.
      
 0.573
LOC106948193
Neuro-oncological ventral antigen 1.
      
 0.573
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
      
 0.565
pdxk
Pyridoxal (pyridoxine, vitamin B6) kinase a.
      
 0.545
ENSPLAP00000030320
Uncharacterized protein.
      
 0.545
ubxn1
UBX domain protein 1.
      
 0.538
fam189b
Si:dkey-7f3.9.
      
 0.527
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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