STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parp16Poly [ADP-ribose] polymerase. (328 aa)    
Predicted Functional Partners:
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.832
ENSPLAP00000016678
WD repeat domain 59.
    
 0.746
wdr24
WD repeat domain 24.
    
 0.743
castor2
Cytosolic arginine sensor for mTORC1 subunit 2.
    
 0.717
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
    
 0.717
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
     
 0.653
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
     
 0.649
rnf13
Ring finger protein 13.
    
 
 0.627
LOC106938219
Uncharacterized protein.
      
 0.545
parp3
Poly [ADP-ribose] polymerase.
      
 0.543
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.