Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106946311Fibrinogen C-terminal domain-containing protein. (203 aa)    
Predicted Functional Partners:
fbln5
Fibulin 5.
   
 0.614
kansl2
KAT8 regulatory NSL complex subunit 2.
    
  0.568
mcrs1
Microspherule protein 1.
    
  0.566
LOC106958071
Microfibril associated protein 5.
   
 
 0.545
MFAP2
Microfibril associated protein 2.
   
 
 0.538
ENSPLAP00000027678
Microfibril associated protein 2.
   
 
 0.538
ENSPLAP00000022184
Uncharacterized protein.
 
 
 
  0.526
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
   
 0.508
tex30
Testis expressed 30.
    
  0.497
kansl3
KAT8 regulatory NSL complex subunit 3.
    
  0.497
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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