STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106946311Fibrinogen C-terminal domain-containing protein. (203 aa)    
Predicted Functional Partners:
kansl2
KAT8 regulatory NSL complex subunit 2.
    
  0.596
fbln5
Fibulin 5.
   
 0.567
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.553
LOC106949456
Macrophage stimulating 1 receptor a.
   
 
  0.553
mst1r
Macrophage stimulating 1 receptor b.
   
 
  0.553
ENSPLAP00000022184
Uncharacterized protein.
 
 
 
  0.531
mcrs1
Microspherule protein 1.
    
 0.501
LOC106958071
Microfibril associated protein 5.
   
 
 0.495
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
   
 0.493
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
  0.487
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.