STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106950987Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a. (553 aa)    
Predicted Functional Partners:
kcnn4
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.
  
  
0.679
LOC106934583
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
     
 0.652
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
 0.640
kcnj13
Potassium inwardly-rectifying channel, subfamily J, member 13.
   
 
 0.601
LOC106938232
ETS domain-containing protein.
   
  
 0.600
LOC106949528
Potassium calcium-activated channel subfamily M alpha 1.
     
 0.594
LOC106944667
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
     
 0.594
LOC106963247
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 
 0.593
LOC106936200
Calmodulin.
    
 
 0.593
LOC106954010
Calmodulin.
    
 
 0.593
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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