STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgnCingulin a. (1201 aa)    
Predicted Functional Partners:
LOC106961235
Tight junction protein 1a; Belongs to the MAGUK family.
   
 
 0.951
LOC106937846
Tight junction protein 1b; Belongs to the MAGUK family.
   
 
 0.951
arhgef2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
     
 0.950
arhgef18
Rho/rac guanine nucleotide exchange factor (GEF) 18b.
     
 0.909
tjp2
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
   
 
 0.835
LOC106949667
Tight junction protein 3; Belongs to the MAGUK family.
   
 
 0.834
LOC106947459
Occludin a.
     
 0.726
ENSPLAP00000007235
PH domain-containing protein.
     
 0.644
LOC106936881
Uncharacterized protein.
     
 0.644
LOC106940665
Uncharacterized protein.
     
 0.644
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.