STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947210TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (599 aa)    
Predicted Functional Partners:
tradd
Tnfrsf1a-associated via death domain.
    
 0.987
tnfrsf1a
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.985
LOC106956448
Tumor necrosis factor receptor superfamily, member 1B.
   
 0.970
LOC106953890
Mitogen-activated protein kinase kinase kinase 14a.
    
 0.963
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.963
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
0.963
birc2
Baculoviral IAP repeat containing 2.
   
 0.960
LOC106964079
X-linked inhibitor of apoptosis.
   
 0.958
map3k5
Mitogen-activated protein kinase kinase kinase 5.
    
 0.956
LOC106954894
Si:ch211-1i11.3.
    
 0.956
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.