STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106935782Uncharacterized protein. (97 aa)    
Predicted Functional Partners:
LOC106938463
Apolipoprotein Eb.
  
 
 0.694
LOC106965007
Apolipoprotein A-Ib.
   
 
 0.679
LOC106946889
Uncharacterized protein.
     
 0.667
LOC106946887
Apolipoprotein Ea.
   
 
 0.595
lpl
Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.
     
 0.560
LOC106943674
Very low density lipoprotein receptor.
     
  0.560
VLDLR
Very low-density lipoprotein receptor-like.
     
  0.560
LOC106943448
Very low-density lipoprotein receptor-like.
     
  0.560
lipc
Lipase, hepatic a.
     
  0.540
ENSPLAP00000027363
Uncharacterized protein.
      
 0.495
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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