Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106953599Zgc:66447. (632 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.757
ENSPLAP00000014229
Meiotic nuclear divisions 1 homolog (S. cerevisiae).
      
 0.721
xbp1
X-box binding protein 1.
      
 0.708
ENSPLAP00000009195
LIM zinc-binding domain-containing protein.
    
 
 0.705
CLVS1
Clavesin 1.
    
 
 0.696
rnf6
Ring finger protein (C3H2C3 type) 6.
    
 
 0.696
clvs2
Clavesin 2.
    
 
 0.696
mkln1
Muskelin 1, intracellular mediator containing kelch motifs.
      
 0.686
LOC106960360
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.681
LOC106951954
SH3 and PX domains 2Aa.
    
 
 0.677
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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