STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106941723ATP-binding cassette, sub-family G (WHITE), member 2c. (590 aa)    
Predicted Functional Partners:
ENSPLAP00000000341
ATP-binding cassette, sub-family G (WHITE), member 2d.
  
  
 
0.955
LOC106962940
ATP-binding cassette, sub-family G (WHITE), member 2a.
  
  
 
0.911
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
0.901
LOC106947280
Uncharacterized protein.
  
0.769
LOC106947261
Uncharacterized protein.
  
0.769
LOC106947281
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 0.655
LOC106938462
Uncharacterized protein.
   
 0.650
LOC106938461
Uncharacterized protein.
   
 0.650
cdca8
Cell division cycle associated 8.
  
 
 0.644
atp5f1c
ATP synthase subunit gamma.
  
   0.643
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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