STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc16Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (382 aa)    
Predicted Functional Partners:
LOC106961469
Uncharacterized protein.
    
 
 0.642
ckap4
Uncharacterized protein.
     
 0.620
ENSPLAP00000027738
SKA2 domain-containing protein.
   
 
 0.619
CLSPN
Claspin.
   
 
 0.581
LOC106944053
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1.
    
 
 0.580
zranb3
Zinc finger, RAN-binding domain containing 3.
    
 
 0.580
ENSPLAP00000007900
Uncharacterized protein.
   
 
 0.579
ska1
Uncharacterized protein.
   
 
 0.579
timeless
Timeless circadian clock.
   
 
 0.561
tipin
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
    
 
 0.555
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.