STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tesTestis derived transcript (3 LIM domains). (585 aa)    
Predicted Functional Partners:
VANGL2
Vang-like protein.
    
 0.772
VANGL1
Vang-like protein.
    
 0.772
LOC106957188
Vang-like protein.
    
 0.772
LOC106954543
Enah/Vasp-like b.
    
 0.756
ENSPLAP00000023312
WH1 domain-containing protein.
    
 0.756
ENSPLAP00000024504
Vasodilator stimulated phosphoprotein b.
    
 0.756
LOC106963703
Enah/Vasp-like.
    
 0.756
dvl3
Uncharacterized protein.
    
 0.699
dvl2
Dishevelled segment polarity protein 2.
    
 0.699
dvl1
Dishevelled segment polarity protein 1a.
    
 0.699
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.