Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPLAP00000011979 | aff4 | ENSPLAP00000011979 | ENSPLAP00000019583 | ELL domain-containing protein. | AF4/FMR2 family, member 4. | 0.896 |
ENSPLAP00000011979 | eaf1 | ENSPLAP00000011979 | ENSPLAP00000017879 | ELL domain-containing protein. | ELL associated factor 1. | 0.931 |
ENSPLAP00000011979 | eaf2 | ENSPLAP00000011979 | ENSPLAP00000008121 | ELL domain-containing protein. | ELL associated factor 2. | 0.898 |
ENSPLAP00000011979 | polr2b | ENSPLAP00000011979 | ENSPLAP00000000044 | ELL domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.815 |
ENSPLAP00000011979 | polr2i | ENSPLAP00000011979 | ENSPLAP00000024445 | ELL domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.803 |
ENSPLAP00000029960 | aff4 | ENSPLAP00000029960 | ENSPLAP00000019583 | ELL domain-containing protein. | AF4/FMR2 family, member 4. | 0.896 |
ENSPLAP00000029960 | eaf1 | ENSPLAP00000029960 | ENSPLAP00000017879 | ELL domain-containing protein. | ELL associated factor 1. | 0.931 |
ENSPLAP00000029960 | eaf2 | ENSPLAP00000029960 | ENSPLAP00000008121 | ELL domain-containing protein. | ELL associated factor 2. | 0.898 |
ENSPLAP00000029960 | polr2b | ENSPLAP00000029960 | ENSPLAP00000000044 | ELL domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.815 |
ENSPLAP00000029960 | polr2i | ENSPLAP00000029960 | ENSPLAP00000024445 | ELL domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.803 |
LOC106953024 | LOC106953774 | ENSPLAP00000022247 | ENSPLAP00000000480 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.404 |
LOC106953024 | aff4 | ENSPLAP00000022247 | ENSPLAP00000019583 | Uncharacterized protein. | AF4/FMR2 family, member 4. | 0.842 |
LOC106953024 | eaf1 | ENSPLAP00000022247 | ENSPLAP00000017879 | Uncharacterized protein. | ELL associated factor 1. | 0.885 |
LOC106953024 | eaf2 | ENSPLAP00000022247 | ENSPLAP00000008121 | Uncharacterized protein. | ELL associated factor 2. | 0.885 |
LOC106953024 | polr2b | ENSPLAP00000022247 | ENSPLAP00000000044 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.809 |
LOC106953024 | polr2i | ENSPLAP00000022247 | ENSPLAP00000024445 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.802 |
LOC106953774 | LOC106953024 | ENSPLAP00000000480 | ENSPLAP00000022247 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.404 |
LOC106953774 | aff4 | ENSPLAP00000000480 | ENSPLAP00000019583 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | AF4/FMR2 family, member 4. | 0.896 |
LOC106953774 | eaf1 | ENSPLAP00000000480 | ENSPLAP00000017879 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | ELL associated factor 1. | 0.931 |
LOC106953774 | eaf2 | ENSPLAP00000000480 | ENSPLAP00000008121 | Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | ELL associated factor 2. | 0.898 |
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