STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
khsrpKH-type splicing regulatory protein. (647 aa)    
Predicted Functional Partners:
LOC106960306
Uncharacterized protein.
   
 
 0.799
PUF60
Poly-U binding splicing factor b.
   
 
 0.799
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
    
 0.772
exosc2
Exosome component 2.
   
  0.698
dcp2
Decapping mRNA 2.
     
 0.637
LOC106941750
Survival of motor neuron 1, telomeric.
    
 
 0.631
exosc5
Exosome component 5.
     
 0.621
LOC106964589
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
  0.621
hnrnpa1
Heterogeneous nuclear ribonucleoprotein A1b.
   
 
 0.621
dis3
DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.
     
 0.610
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.