STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000008333Olfactory receptor C family, h1. (822 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.627
LOC106948452
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.560
LOC106946560
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
    
 0.539
LOC106949452
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
    
 0.539
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.533
ENSPLAP00000025226
PARK2 co-regulated.
   
 
 0.531
ENSPLAP00000014192
NDK domain-containing protein.
    
   0.529
ENSPLAP00000021729
Uncharacterized protein.
    
   0.522
LOC106959359
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.515
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.513
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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