STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106954929WAS protein family homolog 1. (486 aa)    
Predicted Functional Partners:
washc3
WASH complex subunit 3.
    
 0.982
washc5
WASH complex subunit 5.
   
 0.957
LOC106955185
CAP-ZIP_m domain-containing protein.
    
 
 0.928
LOC106944025
WASH-7_N domain-containing protein.
    
 0.873
washc4
WASH complex subunit 4.
    
 0.873
hsbp1
Heat shock factor binding protein 1a.
     
 0.860
ENSPLAP00000026695
Uncharacterized protein.
     
 0.800
rcsd1
Zgc:153184.
    
 
 0.792
ENSPLAP00000012111
CAP-ZIP_m domain-containing protein.
    
 
 0.792
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.740
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.