STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
edil3EGF-like repeats and discoidin I-like domains 3a. (347 aa)    
Predicted Functional Partners:
pros1
Protein S.
   
 0.754
lman1
Lectin, mannose-binding, 1.
    
 0.720
atp7a
ATPase copper transporting alpha.
  
 
 0.715
ENSPLAP00000024892
ATPase copper transporting beta.
  
 
 0.715
aasdh
Aminoadipate-semialdehyde dehydrogenase.
     
 0.710
mcfd2
Multiple coagulation factor deficiency 2.
     
 0.709
fech
Ferrochelatase; Belongs to the ferrochelatase family.
  
 
 0.706
LOC106962180
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.687
slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.687
ENSPLAP00000022211
Frataxin.
     
 0.671
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (28%) [HD]