STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dennd11DENN domain containing 11. (490 aa)    
Predicted Functional Partners:
ENSPLAP00000007354
AVL9 homolog (S. cerevisiase).
      
 0.487
dennd10
DENN domain containing 10.
      
 0.487
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
      
 0.485
dennd6a
DENN/MADD domain containing 6Aa.
      
 0.485
rab30
RAB30, member RAS oncogene family.
      
 0.405
rab33b
RAB33B, member RAS oncogene family a.
      
 0.403
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.