Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPLAP00000012548 | fam107b | ENSPLAP00000012548 | ENSPLAP00000009424 | ZP domain-containing protein. | Family with sequence similarity 107 member B. | 0.722 |
LOC106945532 | LOC106949456 | ENSPLAP00000028558 | ENSPLAP00000030032 | Si:ch73-335l21.4. | Macrophage stimulating 1 receptor a. | 0.715 |
LOC106945532 | fam107b | ENSPLAP00000028558 | ENSPLAP00000009424 | Si:ch73-335l21.4. | Family with sequence similarity 107 member B. | 0.628 |
LOC106945532 | met | ENSPLAP00000028558 | ENSPLAP00000026056 | Si:ch73-335l21.4. | MET proto-oncogene, receptor tyrosine kinase. | 0.715 |
LOC106945532 | mst1r | ENSPLAP00000028558 | ENSPLAP00000030460 | Si:ch73-335l21.4. | Macrophage stimulating 1 receptor b. | 0.715 |
LOC106945532 | mysm1 | ENSPLAP00000028558 | ENSPLAP00000027471 | Si:ch73-335l21.4. | Myb-like, SWIRM and MPN domains 1. | 0.808 |
LOC106945532 | slf1 | ENSPLAP00000028558 | ENSPLAP00000031590 | Si:ch73-335l21.4. | SMC5-SMC6 complex localization factor 1. | 0.624 |
LOC106949456 | LOC106945532 | ENSPLAP00000030032 | ENSPLAP00000028558 | Macrophage stimulating 1 receptor a. | Si:ch73-335l21.4. | 0.715 |
LOC106949456 | fam107b | ENSPLAP00000030032 | ENSPLAP00000009424 | Macrophage stimulating 1 receptor a. | Family with sequence similarity 107 member B. | 0.579 |
LOC106949456 | met | ENSPLAP00000030032 | ENSPLAP00000026056 | Macrophage stimulating 1 receptor a. | MET proto-oncogene, receptor tyrosine kinase. | 0.755 |
LOC106949456 | mst1r | ENSPLAP00000030032 | ENSPLAP00000030460 | Macrophage stimulating 1 receptor a. | Macrophage stimulating 1 receptor b. | 0.760 |
LOC106963691 | fam107b | ENSPLAP00000012540 | ENSPLAP00000009424 | ZP domain-containing protein. | Family with sequence similarity 107 member B. | 0.722 |
arid4a | arid4b | ENSPLAP00000002206 | ENSPLAP00000024405 | AT rich interactive domain 4A (RBP1-like). | Translocase of outer mitochondrial membrane 20. | 0.758 |
arid4a | fam107b | ENSPLAP00000002206 | ENSPLAP00000009424 | AT rich interactive domain 4A (RBP1-like). | Family with sequence similarity 107 member B. | 0.616 |
arid4a | mysm1 | ENSPLAP00000002206 | ENSPLAP00000027471 | AT rich interactive domain 4A (RBP1-like). | Myb-like, SWIRM and MPN domains 1. | 0.761 |
arid4b | arid4a | ENSPLAP00000024405 | ENSPLAP00000002206 | Translocase of outer mitochondrial membrane 20. | AT rich interactive domain 4A (RBP1-like). | 0.758 |
arid4b | fam107b | ENSPLAP00000024405 | ENSPLAP00000009424 | Translocase of outer mitochondrial membrane 20. | Family with sequence similarity 107 member B. | 0.616 |
arid4b | mysm1 | ENSPLAP00000024405 | ENSPLAP00000027471 | Translocase of outer mitochondrial membrane 20. | Myb-like, SWIRM and MPN domains 1. | 0.761 |
fam107b | ENSPLAP00000012548 | ENSPLAP00000009424 | ENSPLAP00000012548 | Family with sequence similarity 107 member B. | ZP domain-containing protein. | 0.722 |
fam107b | LOC106945532 | ENSPLAP00000009424 | ENSPLAP00000028558 | Family with sequence similarity 107 member B. | Si:ch73-335l21.4. | 0.628 |
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