STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syne3Spectrin repeat containing, nuclear envelope family member 3. (969 aa)    
Predicted Functional Partners:
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.714
LOC106956946
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.714
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.688
ENSPLAP00000001163
Uncharacterized protein.
   
  0.637
magi3
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
   
  0.637
LOC106961367
Uncharacterized protein.
   
  0.637
ENSPLAP00000001432
Uncharacterized protein.
   
 0.581
ctnna1
Catenin (cadherin-associated protein), alpha 1.
   
 0.581
LOC106948405
Catenin (cadherin-associated protein), alpha 2.
   
 0.581
ENSPLAP00000008466
Uncharacterized protein.
   
 0.581
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.